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“The UCSD Big Data Freeway System”
Invited Short Talk
Workshop on “Enriching Human Life and Society”
UC San Diego
February 6, 2014

Dr. Larry Smarr
Director, California Institute for Telecommunications and Information Technology
Harry E. Gruber Professor,
Dept. of Computer Science and Engineering
Jacobs School of Engineering, UCSD
1
http://lsmarr.calit2.net
The Data-Intensive Discovery Era Requires
High Performance Cyberinfrastructure
• Growth of Digital Data is Exponential
– “Data Tsunami”

• Driven by Advances in Digital Detectors, Computing,
Networking, & Storage Technologies
• Shared Internet Optimized for Megabyte-Size Objects
• Need Dedicated Photonic Cyberinfrastructure for
Gigabyte/Terabyte Data Objects
• Finding Patterns in the Data is the New Imperative
–
–
–
–

Data-Driven Applications
Data Mining
Visual Analytics
Data Analysis Workflows
Source: SDSC
California Has the Most Advanced
Big Data Optical Network in the Nation

 3,800+ miles of optical fiber
 Members in all 58 counties connect via
fiber-optic cable or leased circuits
from telecom carriers
• Nearly 10,000 sites
connect to CENIC
 10,000,000+ Californians
use CENIC each day
 Governed by members on
the segmental level
CENIC is Rapidly Moving to Connect
at 100 Gbps Across the State and Nation

DOE

Internet2
Global Innovation Centers are Being Connected
with 10,000 Megabits/sec Clear Channel Lightpaths

Members of This Global Network
Meet Annually at the Qualcomm Institute
Source: Maxine Brown, UIC and Robert Patterson, NCSA
Connecting YOU on UCSD Campus with the World
By Creating a Big Data Freeway System

NSF CC-NIE Has Awarded Prism@UCSD Optical Switch
Phil Papadopoulos, SDSC, Calit2, PI
PRISM Puts SDSC’s Big Data Gordon Supercomputer
and Data Oasis Storage Into Your Lab

12
Comet is a ~2000TeraFLOP System Architected
for the “Long Tail of Science”
NSF Track 2 award to SDSC
$12M NSF award to acquire
$3M/yr x 4 yrs to operate
Production early 2015
PRISM is Connecting CERN’s CMS Experiment
To Our Physics Department

80 Gbps PRISM Connection Has Been Made
Planning for climate change in California
substantial shifts on top of already high climate variability
SIO Campus Climate Researchers Need to Download
Results from Remote Supercomputer Simulations
to Make Regional Climate Change Forecasts
Dan Cayan
USGS Water Resources Discipline
Scripps Institution of Oceanography, UC San Diego
much support from Mary Tyree, Mike Dettinger, Guido Franco and
other colleagues

Sponsors:
California Energy Commission
NOAA RISA program
California DWR, DOE, NSF
PRISM Links Calit2’s VROOM to NCMIR to Explore
Confocal Light Microscope Images of Rat Brains
Protein Data Bank (PDB) Needs
Bandwidth to Connect Resources and Users
• Archive of experimentally
determined 3D structures of
proteins, nucleic acids, complex
assemblies
• One of the largest scientific
resources in life sciences

Virus

Hemoglobin

Source: Phil Bourne and
Andreas Prlić, PDB
PRISM Will Link Computational Mass Spectrometry
and Genome Sequencing Cores to the Big Data Freeway
Source: proteomics.ucsd.edu

ProteoSAFe: Compute-intensive
discovery MS at the click of a button

MassIVE: repository and
identification platform for all
MS data in the world
Virtual Jazz-Coupling UCI with UCSD
With a Gbps Lightwave
Collaboration Between EVL’s CAVE2
and Calit2’s VROOM Over 10Gb Wavelength

Calit2
EVL

Source: NTT Sponsored ON*VECTOR Workshop at Calit2 March 6, 2013

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The UCSD Big Data Freeway System

  • 1. “The UCSD Big Data Freeway System” Invited Short Talk Workshop on “Enriching Human Life and Society” UC San Diego February 6, 2014 Dr. Larry Smarr Director, California Institute for Telecommunications and Information Technology Harry E. Gruber Professor, Dept. of Computer Science and Engineering Jacobs School of Engineering, UCSD 1 http://lsmarr.calit2.net
  • 2. The Data-Intensive Discovery Era Requires High Performance Cyberinfrastructure • Growth of Digital Data is Exponential – “Data Tsunami” • Driven by Advances in Digital Detectors, Computing, Networking, & Storage Technologies • Shared Internet Optimized for Megabyte-Size Objects • Need Dedicated Photonic Cyberinfrastructure for Gigabyte/Terabyte Data Objects • Finding Patterns in the Data is the New Imperative – – – – Data-Driven Applications Data Mining Visual Analytics Data Analysis Workflows Source: SDSC
  • 3. California Has the Most Advanced Big Data Optical Network in the Nation  3,800+ miles of optical fiber  Members in all 58 counties connect via fiber-optic cable or leased circuits from telecom carriers • Nearly 10,000 sites connect to CENIC  10,000,000+ Californians use CENIC each day  Governed by members on the segmental level
  • 4. CENIC is Rapidly Moving to Connect at 100 Gbps Across the State and Nation DOE Internet2
  • 5. Global Innovation Centers are Being Connected with 10,000 Megabits/sec Clear Channel Lightpaths Members of This Global Network Meet Annually at the Qualcomm Institute Source: Maxine Brown, UIC and Robert Patterson, NCSA
  • 6. Connecting YOU on UCSD Campus with the World By Creating a Big Data Freeway System NSF CC-NIE Has Awarded Prism@UCSD Optical Switch Phil Papadopoulos, SDSC, Calit2, PI
  • 7. PRISM Puts SDSC’s Big Data Gordon Supercomputer and Data Oasis Storage Into Your Lab 12
  • 8. Comet is a ~2000TeraFLOP System Architected for the “Long Tail of Science” NSF Track 2 award to SDSC $12M NSF award to acquire $3M/yr x 4 yrs to operate Production early 2015
  • 9. PRISM is Connecting CERN’s CMS Experiment To Our Physics Department 80 Gbps PRISM Connection Has Been Made
  • 10. Planning for climate change in California substantial shifts on top of already high climate variability SIO Campus Climate Researchers Need to Download Results from Remote Supercomputer Simulations to Make Regional Climate Change Forecasts Dan Cayan USGS Water Resources Discipline Scripps Institution of Oceanography, UC San Diego much support from Mary Tyree, Mike Dettinger, Guido Franco and other colleagues Sponsors: California Energy Commission NOAA RISA program California DWR, DOE, NSF
  • 11. PRISM Links Calit2’s VROOM to NCMIR to Explore Confocal Light Microscope Images of Rat Brains
  • 12. Protein Data Bank (PDB) Needs Bandwidth to Connect Resources and Users • Archive of experimentally determined 3D structures of proteins, nucleic acids, complex assemblies • One of the largest scientific resources in life sciences Virus Hemoglobin Source: Phil Bourne and Andreas Prlić, PDB
  • 13. PRISM Will Link Computational Mass Spectrometry and Genome Sequencing Cores to the Big Data Freeway Source: proteomics.ucsd.edu ProteoSAFe: Compute-intensive discovery MS at the click of a button MassIVE: repository and identification platform for all MS data in the world
  • 14. Virtual Jazz-Coupling UCI with UCSD With a Gbps Lightwave
  • 15. Collaboration Between EVL’s CAVE2 and Calit2’s VROOM Over 10Gb Wavelength Calit2 EVL Source: NTT Sponsored ON*VECTOR Workshop at Calit2 March 6, 2013